 export RDP_JAR_PATH=/Applications/rdp_classifier_2.2/rdp_classifier-2.2.jar
  python /Users/caporaso/code/Qiime/scripts/assign_taxonomy.py -t /Users/caporaso/data/gg_otus_4feb2011/taxonomies/greengenes_tax_rdp_train.txt -r /Users/caporaso/data/gg_otus_4feb2011/rep_set/gg_97_otus_4feb2011.fasta -c 0.80 -m rdp -o /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy//RDP_IUbHy_ -i /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy/RDP_IUbHy_.0.fasta --rdp_max_memory 1000 
 mv /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy//RDP_IUbHy_/RDP_IUbHy_.0_tax_assignments.log /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy//RDP_IUbHy_.0_tax_assignments.log
 mv /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy//RDP_IUbHy_/RDP_IUbHy_.0_tax_assignments.txt /Users/caporaso/code/qiime_test_data/parallel_assign_taxonomy_rdp/rdp_assigned_taxonomy//RDP_IUbHy_.0_tax_assignments.txt 